caption a7 comparative analysis Search Results


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Statistical data summary of the USDA_OmykA_1.1 (Arlee) rainbow trout genome assembly
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Statistical data summary of the USDA_OmykA_1.1 (Arlee) rainbow trout genome assembly
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Statistical data summary of the USDA_OmykA_1.1 (Arlee) rainbow trout genome assembly
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Image Search Results


Statistical data summary of the USDA_OmykA_1.1 (Arlee) rainbow trout genome assembly

Journal: G3: Genes|Genomes|Genetics

Article Title: A long reads-based de-novo assembly of the genome of the Arlee homozygous line reveals chromosomal rearrangements in rainbow trout

doi: 10.1093/g3journal/jkab052

Figure Lengend Snippet: Statistical data summary of the USDA_OmykA_1.1 (Arlee) rainbow trout genome assembly

Article Snippet: The total length of the 710 unplaced scaffolds that are not anchored to a chromosome is ∼108 Mb. table ft1 table-wrap mode="anchored" t5 caption a7 Feature Canu contigs Polished contigs BioNano scaffolds Hi-C scaffolds With linkage information Number of sequences 1,591 1,591 1,044 919 938 Total length 2,340,653,759 2,341,478,269 2,341,947,072 2,342,042,072 2,341,652,372 Maximum length 63,126,076 63,163,333 88,429,459 90,526,592 88,429,459 Minimum length 1,061 1,057 16,956 16,956 16,956 N50 9,835,815 9,837,718 28,011,862 47,542,702 39,165,350 L50 58 58 31 17 22 N90 1,125,404 1,125,715 1,804,217 2,489,804 2,487,114 L90 333 333 170 98 116 BUSCO * C: 95.9% (S: 48.3%; D: 47.6%) C: 96.2% (S: 46.2%; D: 50.0%) NA C: 96.4% (S: 46.7%; D: 49.7%) NA Open in a separate window * Benchmarking Universal Single-Copy Orthologs.

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